Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Limch1Q3UH68 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Grk6-205ENSMUST00000224653 2976 ntBASIC15.91■□□□□ 0.14
Limch1Q3UH68 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Mir7085-201ENSMUST00000184353 66 ntBASIC15.91■□□□□ 0.14
Limch1Q3UH68 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.91■□□□□ 0.14
Limch1Q3UH68 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Limch1Q3UH68 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.9■□□□□ 0.14
Limch1Q3UH68 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.9■□□□□ 0.14
Limch1Q3UH68 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.9■□□□□ 0.14
Limch1Q3UH68 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.9■□□□□ 0.14
Limch1Q3UH68 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.9■□□□□ 0.14
Limch1Q3UH68 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm15824-201ENSMUST00000119516 955 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm17150-201ENSMUST00000165577 381 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm5354-201ENSMUST00000182417 973 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm6266-201ENSMUST00000203844 806 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.89■□□□□ 0.13
Limch1Q3UH68 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.89■□□□□ 0.13
Limch1Q3UH68 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Limch1Q3UH68 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms