Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.7□□□□□ -0.38
Mmp25Q3U435 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.7□□□□□ -0.38
Mmp25Q3U435 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.7□□□□□ -0.38
Mmp25Q3U435 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.7□□□□□ -0.38
Mmp25Q3U435 Gm26315-201ENSMUST00000083890 321 ntBASIC12.7□□□□□ -0.38
Mmp25Q3U435 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Mmp25Q3U435 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp25Q3U435 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Mmp25Q3U435 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm5745-201ENSMUST00000183748 313 ntBASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm17794-201ENSMUST00000220252 955 ntBASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm18473-201ENSMUST00000220543 868 ntBASIC12.68□□□□□ -0.38
Mmp25Q3U435 Gm5356-201ENSMUST00000093326 615 ntBASIC12.68□□□□□ -0.38
Mmp25Q3U435 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Mmp25Q3U435 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms