Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm18905-201ENSMUST00000205454 928 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Khdc4Q3TCX3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Acot6-202ENSMUST00000222921 3622 ntBASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Khdc4Q3TCX3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Gm9899-201ENSMUST00000065519 555 ntBASIC12.85□□□□□ -0.35
Khdc4Q3TCX3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms