Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hddc2Q3SXD3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hddc2Q3SXD3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm13464-201ENSMUST00000119418 935 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm6550-201ENSMUST00000187574 993 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm2451-201ENSMUST00000199447 999 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm10290-201ENSMUST00000200451 999 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hddc2Q3SXD3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Syt7-205ENSMUST00000224135 1557 ntBASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hddc2Q3SXD3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hddc2Q3SXD3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hddc2Q3SXD3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms