Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccbe1Q3MI99 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Gm5364-201ENSMUST00000216789 889 ntBASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccbe1Q3MI99 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 BC043934-202ENSMUST00000185694 2356 ntBASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccbe1Q3MI99 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm37447-201ENSMUST00000195625 2928 ntBASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccbe1Q3MI99 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms