Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm29541-201ENSMUST00000191351 678 ntBASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Gm5312-201ENSMUST00000203728 547 ntBASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ptchd3Q0EEE2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gm14701-201ENSMUST00000117156 348 ntBASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ptchd3Q0EEE2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.04□□□□□ -0.32
Ptchd3Q0EEE2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms