Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.94□□□□□ -0.34
Hoxc4Q08624 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Gm10268-201ENSMUST00000085340 555 ntBASIC12.94□□□□□ -0.34
Hoxc4Q08624 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.94□□□□□ -0.34
Hoxc4Q08624 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc4Q08624 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.93□□□□□ -0.34
Hoxc4Q08624 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.93□□□□□ -0.34
Hoxc4Q08624 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Hoxc4Q08624 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Gm10146-201ENSMUST00000072739 309 ntBASIC12.93□□□□□ -0.34
Hoxc4Q08624 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Hoxc4Q08624 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Gm11978-201ENSMUST00000122315 466 ntBASIC12.92□□□□□ -0.34
Hoxc4Q08624 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.92□□□□□ -0.34
Hoxc4Q08624 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hoxc4Q08624 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms