Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm27892-201ENSMUST00000185017 106 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm2495-201ENSMUST00000191160 466 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.78□□□□□ -0.36
Nkx3-2P97503 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Gm8463-201ENSMUST00000208573 613 ntBASIC12.78□□□□□ -0.36
Nkx3-2P97503 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
Nkx3-2P97503 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.78□□□□□ -0.36
Nkx3-2P97503 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.78□□□□□ -0.36
Nkx3-2P97503 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx3-2P97503 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.77□□□□□ -0.36
Nkx3-2P97503 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.77□□□□□ -0.36
Nkx3-2P97503 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nkx3-2P97503 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Mir1894-201ENSMUST00000122802 81 ntBASIC12.77□□□□□ -0.37
Nkx3-2P97503 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Gm8602-201ENSMUST00000184045 607 ntBASIC12.77□□□□□ -0.37
Nkx3-2P97503 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Gm24447-201ENSMUST00000083977 338 ntBASIC12.77□□□□□ -0.37
Nkx3-2P97503 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nkx3-2P97503 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms