Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm14585-201ENSMUST00000120713 634 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Gm9132-201ENSMUST00000210182 832 ntBASIC8.94□□□□□ -0.98
PrkdcP97313 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PrkdcP97313 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
PrkdcP97313 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC8.93□□□□□ -0.98
PrkdcP97313 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm14644-201ENSMUST00000116671 647 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC8.93□□□□□ -0.98
PrkdcP97313 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm25201-201ENSMUST00000083093 170 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PrkdcP97313 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
PrkdcP97313 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 AC162938.1-201ENSMUST00000213140 2323 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PrkdcP97313 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Gm28882-201ENSMUST00000185504 314 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
PrkdcP97313 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm5904-201ENSMUST00000210286 865 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.93□□□□□ -0.98
PrkdcP97313 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.93□□□□□ -0.98
PrkdcP97313 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC8.93□□□□□ -0.98
PrkdcP97313 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm5732-201ENSMUST00000182596 1007 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm3619-201ENSMUST00000219947 775 ntBASIC8.93□□□□□ -0.98
PrkdcP97313 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PrkdcP97313 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PrkdcP97313 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm42657-201ENSMUST00000201746 211 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm13384-201ENSMUST00000117166 1344 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Gm12620-201ENSMUST00000119791 1986 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Gm12612-201ENSMUST00000140182 1986 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm16071-201ENSMUST00000119589 793 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm4879-201ENSMUST00000122190 1272 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Gm23771-201ENSMUST00000178702 110 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Gm17826-201ENSMUST00000189720 798 ntBASIC8.92□□□□□ -0.98
PrkdcP97313 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PrkdcP97313 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.92□□□□□ -0.98
PrkdcP97313 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PrkdcP97313 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms