Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim43cP86449 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim43cP86449 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim43cP86449 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm38144-201ENSMUST00000192790 465 ntBASIC14.68□□□□□ -0.06
Trim43cP86449 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim43cP86449 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim43cP86449 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim43cP86449 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.68□□□□□ -0.06
Trim43cP86449 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trim43cP86449 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim43cP86449 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim43cP86449 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim43cP86449 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm5866-201ENSMUST00000177881 973 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim43cP86449 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm37917-201ENSMUST00000194711 392 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.67□□□□□ -0.06
Trim43cP86449 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim43cP86449 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trim43cP86449 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trim43cP86449 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim43cP86449 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trim43cP86449 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43cP86449 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43cP86449 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trim43cP86449 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim43cP86449 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.66□□□□□ -0.06
Trim43cP86449 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim43cP86449 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms