Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm5745-201ENSMUST00000183748 313 ntBASIC12.06□□□□□ -0.48
SgcbP82349 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SgcbP82349 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.06□□□□□ -0.48
SgcbP82349 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SgcbP82349 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SgcbP82349 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SgcbP82349 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SgcbP82349 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SgcbP82349 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.05□□□□□ -0.48
SgcbP82349 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SgcbP82349 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
SgcbP82349 Gm15371-201ENSMUST00000117057 784 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Gm15376-201ENSMUST00000122258 783 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.05□□□□□ -0.48
SgcbP82349 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.05□□□□□ -0.48
SgcbP82349 Gm42550-201ENSMUST00000201553 960 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcbP82349 Gm7653-201ENSMUST00000214567 508 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gm5161-201ENSMUST00000075243 853 ntBASIC12.05□□□□□ -0.48
SgcbP82349 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.05□□□□□ -0.48
SgcbP82349 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SgcbP82349 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SgcbP82349 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SgcbP82349 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Gm11478-201ENSMUST00000117851 599 ntBASIC12.04□□□□□ -0.48
SgcbP82349 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.04□□□□□ -0.48
SgcbP82349 Gm5186-201ENSMUST00000218781 920 ntBASIC12.04□□□□□ -0.48
SgcbP82349 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SgcbP82349 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SgcbP82349 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.04□□□□□ -0.48
SgcbP82349 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SgcbP82349 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
SgcbP82349 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.04□□□□□ -0.48
SgcbP82349 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms