Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.21■□□□□ 0.19
Rad50P70388 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rad50P70388 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.21■□□□□ 0.19
Rad50P70388 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Rad50P70388 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rad50P70388 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rad50P70388 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.21■□□□□ 0.19
Rad50P70388 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.21■□□□□ 0.19
Rad50P70388 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rad50P70388 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rad50P70388 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rad50P70388 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rad50P70388 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.2■□□□□ 0.18
Rad50P70388 Mir7654-201ENSMUST00000185082 70 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.2■□□□□ 0.18
Rad50P70388 Gm28911-201ENSMUST00000188837 117 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.2■□□□□ 0.18
Rad50P70388 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.2■□□□□ 0.18
Rad50P70388 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.2■□□□□ 0.18
Rad50P70388 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.2■□□□□ 0.18
Rad50P70388 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rad50P70388 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rad50P70388 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Rad50P70388 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.2■□□□□ 0.18
Rad50P70388 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Rad50P70388 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Rad50P70388 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rad50P70388 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rad50P70388 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.19■□□□□ 0.18
Rad50P70388 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.19■□□□□ 0.18
Rad50P70388 Gm13829-201ENSMUST00000119600 138 ntBASIC16.19■□□□□ 0.18
Rad50P70388 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Rad50P70388 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.19■□□□□ 0.18
Rad50P70388 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rad50P70388 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.19■□□□□ 0.18
Rad50P70388 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.19■□□□□ 0.18
Rad50P70388 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.19■□□□□ 0.18
Rad50P70388 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.19■□□□□ 0.18
Rad50P70388 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.19■□□□□ 0.18
Rad50P70388 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rad50P70388 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.19■□□□□ 0.18
Rad50P70388 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rad50P70388 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rad50P70388 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms