Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Gm5177-201ENSMUST00000183092 997 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Gm27301-201ENSMUST00000184012 127 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Gm17971-201ENSMUST00000190239 806 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Gm5864-201ENSMUST00000202263 970 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.48□□□□□ -0.73
Pfn1P62962 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pfn1P62962 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.48□□□□□ -0.73
Pfn1P62962 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pfn1P62962 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.48□□□□□ -0.73
Pfn1P62962 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Pfn1P62962 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.48□□□□□ -0.73
Pfn1P62962 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pfn1P62962 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Pfn1P62962 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pfn1P62962 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pfn1P62962 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pfn1P62962 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Pfn1P62962 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Pfn1P62962 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pfn1P62962 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Pfn1P62962 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pfn1P62962 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.46□□□□□ -0.73
Pfn1P62962 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Pfn1P62962 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pfn1P62962 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pfn1P62962 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Pfn1P62962 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pfn1P62962 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms