Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ybx1P62960 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ybx1P62960 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ybx1P62960 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.81□□□□□ -0.2
Ybx1P62960 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ybx1P62960 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.81□□□□□ -0.2
Ybx1P62960 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.81□□□□□ -0.2
Ybx1P62960 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.81□□□□□ -0.2
Ybx1P62960 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ybx1P62960 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.81□□□□□ -0.2
Ybx1P62960 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Gm43822-201ENSMUST00000200285 476 ntBASIC13.81□□□□□ -0.2
Ybx1P62960 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.81□□□□□ -0.2
Ybx1P62960 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.81□□□□□ -0.2
Ybx1P62960 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.81□□□□□ -0.2
Ybx1P62960 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ybx1P62960 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ybx1P62960 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Ybx1P62960 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ybx1P62960 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.8□□□□□ -0.2
Ybx1P62960 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ybx1P62960 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm10146-201ENSMUST00000072739 309 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.8□□□□□ -0.2
Ybx1P62960 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ybx1P62960 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ybx1P62960 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.79□□□□□ -0.2
Ybx1P62960 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ybx1P62960 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms