Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.88□□□□□ -0.67
Lmo4P61969 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.88□□□□□ -0.67
Lmo4P61969 Gm25261-201ENSMUST00000157416 134 ntBASIC10.88□□□□□ -0.67
Lmo4P61969 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.88□□□□□ -0.67
Lmo4P61969 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.88□□□□□ -0.67
Lmo4P61969 Gm25927-201ENSMUST00000175058 117 ntBASIC10.88□□□□□ -0.67
Lmo4P61969 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.88□□□□□ -0.67
Lmo4P61969 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.88□□□□□ -0.67
Lmo4P61969 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.88□□□□□ -0.67
Lmo4P61969 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.88□□□□□ -0.67
Lmo4P61969 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC10.88□□□□□ -0.67
Lmo4P61969 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.88□□□□□ -0.67
Lmo4P61969 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Lmo4P61969 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Lmo4P61969 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lmo4P61969 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.87□□□□□ -0.67
Lmo4P61969 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.87□□□□□ -0.67
Lmo4P61969 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.87□□□□□ -0.67
Lmo4P61969 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.87□□□□□ -0.67
Lmo4P61969 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.87□□□□□ -0.67
Lmo4P61969 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lmo4P61969 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lmo4P61969 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Lmo4P61969 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lmo4P61969 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Lmo4P61969 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Lmo4P61969 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms