Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.51□□□□□ -0.25
Lim2P56563 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.51□□□□□ -0.25
Lim2P56563 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Lim2P56563 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Lim2P56563 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.51□□□□□ -0.25
Lim2P56563 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.51□□□□□ -0.25
Lim2P56563 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.51□□□□□ -0.25
Lim2P56563 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.51□□□□□ -0.25
Lim2P56563 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.51□□□□□ -0.25
Lim2P56563 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.51□□□□□ -0.25
Lim2P56563 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.51□□□□□ -0.25
Lim2P56563 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Lim2P56563 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lim2P56563 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.5□□□□□ -0.25
Lim2P56563 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.5□□□□□ -0.25
Lim2P56563 Gm15770-201ENSMUST00000117498 584 ntBASIC13.5□□□□□ -0.25
Lim2P56563 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.5□□□□□ -0.25
Lim2P56563 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Lim2P56563 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.5□□□□□ -0.25
Lim2P56563 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.5□□□□□ -0.25
Lim2P56563 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.5□□□□□ -0.25
Lim2P56563 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lim2P56563 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lim2P56563 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lim2P56563 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Gm15678-201ENSMUST00000117573 960 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Gm12138-201ENSMUST00000122180 951 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.49□□□□□ -0.25
Lim2P56563 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.49□□□□□ -0.25
Lim2P56563 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.49□□□□□ -0.25
Lim2P56563 Gm7653-201ENSMUST00000214567 508 ntBASIC13.49□□□□□ -0.25
Lim2P56563 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Lim2P56563 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lim2P56563 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms