Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ptprs-211ENSMUST00000223859 5588 ntBASIC17■□□□□ 0.31
Msh6P54276 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Msh6P54276 Gm45546-201ENSMUST00000211053 2394 ntBASIC17■□□□□ 0.31
Msh6P54276 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17■□□□□ 0.31
Msh6P54276 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17■□□□□ 0.31
Msh6P54276 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17■□□□□ 0.31
Msh6P54276 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Gm16372-201ENSMUST00000073088 450 ntBASIC17■□□□□ 0.31
Msh6P54276 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Msh6P54276 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Msh6P54276 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Msh6P54276 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.99■□□□□ 0.31
Msh6P54276 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Msh6P54276 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.99■□□□□ 0.31
Msh6P54276 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Msh6P54276 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.99■□□□□ 0.31
Msh6P54276 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.99■□□□□ 0.31
Msh6P54276 Gm21769-201ENSMUST00000211922 111 ntBASIC16.99■□□□□ 0.31
Msh6P54276 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Msh6P54276 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Msh6P54276 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Msh6P54276 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.98■□□□□ 0.31
Msh6P54276 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.98■□□□□ 0.31
Msh6P54276 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Gm6023-201ENSMUST00000118217 606 ntBASIC16.98■□□□□ 0.31
Msh6P54276 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Msh6P54276 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.98■□□□□ 0.31
Msh6P54276 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.98■□□□□ 0.31
Msh6P54276 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Gm17376-201ENSMUST00000166016 84 ntBASIC16.98■□□□□ 0.31
Msh6P54276 Gm27320-201ENSMUST00000184892 109 ntBASIC16.98■□□□□ 0.31
Msh6P54276 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.98■□□□□ 0.31
Msh6P54276 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.98■□□□□ 0.31
Msh6P54276 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Msh6P54276 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Msh6P54276 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Gm15370-201ENSMUST00000117158 253 ntBASIC16.97■□□□□ 0.31
Msh6P54276 Gm11978-201ENSMUST00000122315 466 ntBASIC16.97■□□□□ 0.31
Msh6P54276 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Msh6P54276 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.97■□□□□ 0.31
Msh6P54276 Gm10608-202ENSMUST00000213924 676 ntBASIC16.97■□□□□ 0.31
Msh6P54276 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.97■□□□□ 0.31
Msh6P54276 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.97■□□□□ 0.31
Msh6P54276 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Msh6P54276 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Msh6P54276 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Msh6P54276 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.97■□□□□ 0.31
Msh6P54276 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms