Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.66□□□□□ -0.22
Lhx3P50481 Gm11814-201ENSMUST00000119515 929 ntBASIC13.66□□□□□ -0.22
Lhx3P50481 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.66□□□□□ -0.22
Lhx3P50481 Gm11803-201ENSMUST00000119966 444 ntBASIC13.66□□□□□ -0.22
Lhx3P50481 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.66□□□□□ -0.22
Lhx3P50481 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.66□□□□□ -0.22
Lhx3P50481 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.66□□□□□ -0.22
Lhx3P50481 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx3P50481 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.66□□□□□ -0.22
Lhx3P50481 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.65□□□□□ -0.22
Lhx3P50481 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.65□□□□□ -0.22
Lhx3P50481 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Lhx3P50481 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lhx3P50481 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Gm14350-201ENSMUST00000116642 640 ntBASIC13.65□□□□□ -0.22
Lhx3P50481 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.65□□□□□ -0.22
Lhx3P50481 Gm24196-201ENSMUST00000179161 110 ntBASIC13.65□□□□□ -0.22
Lhx3P50481 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.65□□□□□ -0.22
Lhx3P50481 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.65□□□□□ -0.22
Lhx3P50481 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Lhx3P50481 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.65□□□□□ -0.22
Lhx3P50481 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lhx3P50481 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lhx3P50481 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Lhx3P50481 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Lhx3P50481 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Lhx3P50481 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lhx3P50481 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lhx3P50481 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.64□□□□□ -0.23
Lhx3P50481 Gm17150-201ENSMUST00000165577 381 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Gm27486-201ENSMUST00000184923 80 ntBASIC13.64□□□□□ -0.23
Lhx3P50481 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms