Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atoh1P48985 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Atoh1P48985 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atoh1P48985 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atoh1P48985 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atoh1P48985 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.17■□□□□ 0.02
Atoh1P48985 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.17■□□□□ 0.02
Atoh1P48985 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atoh1P48985 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Gm14028-201ENSMUST00000117434 479 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.17■□□□□ 0.02
Atoh1P48985 Gm12502-201ENSMUST00000120197 444 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Gm14277-201ENSMUST00000121195 360 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.17■□□□□ 0.02
Atoh1P48985 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Gm44967-201ENSMUST00000207047 631 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Gm13097-201ENSMUST00000210722 397 ntBASIC15.17■□□□□ 0.02
Atoh1P48985 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC15.17■□□□□ 0.02
Atoh1P48985 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atoh1P48985 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atoh1P48985 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Atoh1P48985 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Atoh1P48985 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm14263-201ENSMUST00000117955 746 ntBASIC15.16■□□□□ 0.02
Atoh1P48985 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.16■□□□□ 0.02
Atoh1P48985 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm17208-201ENSMUST00000168388 535 ntBASIC15.16■□□□□ 0.02
Atoh1P48985 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.16■□□□□ 0.02
Atoh1P48985 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.16■□□□□ 0.02
Atoh1P48985 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atoh1P48985 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atoh1P48985 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.16■□□□□ 0.02
Atoh1P48985 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.15■□□□□ 0.02
Atoh1P48985 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.15■□□□□ 0.02
Atoh1P48985 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Atoh1P48985 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.15■□□□□ 0.02
Atoh1P48985 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Atoh1P48985 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.15■□□□□ 0.02
Atoh1P48985 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atoh1P48985 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.15■□□□□ 0.02
Atoh1P48985 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Atoh1P48985 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Atoh1P48985 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms