Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 CT009713.8-202ENSMUST00000224732 385 ntBASIC14□□□□□ -0.17
HttP42859 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HttP42859 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14□□□□□ -0.17
HttP42859 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HttP42859 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14□□□□□ -0.17
HttP42859 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14□□□□□ -0.17
HttP42859 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
HttP42859 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC14□□□□□ -0.17
HttP42859 Gm6963-201ENSMUST00000147879 379 ntBASIC14□□□□□ -0.17
HttP42859 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14□□□□□ -0.17
HttP42859 AC166051.1-201ENSMUST00000214313 210 ntBASIC14□□□□□ -0.17
HttP42859 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14□□□□□ -0.17
HttP42859 Gm7114-201ENSMUST00000190159 1789 ntBASIC14□□□□□ -0.17
HttP42859 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
HttP42859 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HttP42859 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HttP42859 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.99□□□□□ -0.17
HttP42859 Gm45598-202ENSMUST00000210719 986 ntBASIC13.99□□□□□ -0.17
HttP42859 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.99□□□□□ -0.17
HttP42859 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.99□□□□□ -0.17
HttP42859 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HttP42859 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.99□□□□□ -0.17
HttP42859 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.99□□□□□ -0.17
HttP42859 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.99□□□□□ -0.17
HttP42859 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Gm13600-201ENSMUST00000117949 744 ntBASIC13.99□□□□□ -0.17
HttP42859 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.99□□□□□ -0.17
HttP42859 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
HttP42859 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.99□□□□□ -0.17
HttP42859 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.99□□□□□ -0.17
HttP42859 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HttP42859 Snora73b-201ENSMUST00000083419 205 ntBASIC13.99□□□□□ -0.17
HttP42859 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HttP42859 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HttP42859 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HttP42859 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
HttP42859 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HttP42859 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.98□□□□□ -0.17
HttP42859 Gm25072-201ENSMUST00000175233 235 ntBASIC13.98□□□□□ -0.17
HttP42859 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.98□□□□□ -0.17
HttP42859 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.98□□□□□ -0.17
HttP42859 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HttP42859 AY036118-201ENSMUST00000200021 923 ntBASIC13.98□□□□□ -0.17
HttP42859 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms