Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cxcl12P40224 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm13665-201ENSMUST00000120830 528 ntBASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.82□□□□□ -0.2
Cxcl12P40224 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl12P40224 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl12P40224 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Gm9083-201ENSMUST00000120423 819 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Gm17208-201ENSMUST00000168388 535 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 AA914427-201ENSMUST00000193194 1166 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.81□□□□□ -0.2
Cxcl12P40224 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl12P40224 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl12P40224 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm11930-201ENSMUST00000117788 190 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12616-201ENSMUST00000118594 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.8□□□□□ -0.2
Cxcl12P40224 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm26361-201ENSMUST00000158868 186 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12624-201ENSMUST00000177615 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12621-201ENSMUST00000177760 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12615-201ENSMUST00000177970 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12622-201ENSMUST00000177975 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12627-201ENSMUST00000178412 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12625-201ENSMUST00000179122 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12614-201ENSMUST00000179586 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm12613-201ENSMUST00000180323 382 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm28450-201ENSMUST00000187349 638 ntBASIC13.8□□□□□ -0.2
Cxcl12P40224 Gm28693-202ENSMUST00000190758 331 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms