Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Mir339-201ENSMUST00000083659 96 ntBASIC19.82■□□□□ 0.76
Chd1P40201 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chd1P40201 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd1P40201 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Chd1P40201 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Gm43823-201ENSMUST00000197391 1808 ntBASIC19.82■□□□□ 0.76
Chd1P40201 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd1P40201 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd1P40201 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC19.82■□□□□ 0.76
Chd1P40201 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1P40201 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Mir1901-201ENSMUST00000122616 78 ntBASIC19.81■□□□□ 0.76
Chd1P40201 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC19.81■□□□□ 0.76
Chd1P40201 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC19.81■□□□□ 0.76
Chd1P40201 Gm37246-201ENSMUST00000192665 835 ntBASIC19.81■□□□□ 0.76
Chd1P40201 Gm44980-201ENSMUST00000205826 314 ntBASIC19.81■□□□□ 0.76
Chd1P40201 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd1P40201 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd1P40201 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chd1P40201 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chd1P40201 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chd1P40201 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1P40201 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC19.8■□□□□ 0.76
Chd1P40201 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC19.8■□□□□ 0.76
Chd1P40201 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chd1P40201 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.8■□□□□ 0.76
Chd1P40201 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chd1P40201 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chd1P40201 Gm42682-201ENSMUST00000198349 1265 ntBASIC19.8■□□□□ 0.76
Chd1P40201 Gm45398-201ENSMUST00000210561 165 ntBASIC19.8■□□□□ 0.76
Chd1P40201 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC19.8■□□□□ 0.76
Chd1P40201 CT030637.1-201ENSMUST00000228016 669 ntBASIC19.8■□□□□ 0.76
Chd1P40201 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Chd1P40201 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.8■□□□□ 0.76
Chd1P40201 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1P40201 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Mir7076-201ENSMUST00000183519 74 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Gm37028-201ENSMUST00000194276 107 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC19.79■□□□□ 0.76
Chd1P40201 Gm18038-201ENSMUST00000197900 485 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC19.79■□□□□ 0.76
Chd1P40201 Gm44552-201ENSMUST00000205458 1247 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Gm270-201ENSMUST00000223010 976 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chd1P40201 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC19.79■□□□□ 0.76
Chd1P40201 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.79■□□□□ 0.76
Chd1P40201 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Gm3765-201ENSMUST00000130985 1447 ntBASIC19.79■□□□□ 0.76
Chd1P40201 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd1P40201 Mir1956-201ENSMUST00000157748 65 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms