Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.1□□□□□ -0.63
Timp3P39876 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.1□□□□□ -0.63
Timp3P39876 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Gm27772-201ENSMUST00000184900 187 ntBASIC11.1□□□□□ -0.63
Timp3P39876 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Gm28911-201ENSMUST00000188837 117 ntBASIC11.1□□□□□ -0.63
Timp3P39876 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.1□□□□□ -0.63
Timp3P39876 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.1□□□□□ -0.63
Timp3P39876 Gm18041-201ENSMUST00000218210 618 ntBASIC11.1□□□□□ -0.63
Timp3P39876 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Timp3P39876 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Timp3P39876 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Timp3P39876 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Timp3P39876 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Timp3P39876 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Timp3P39876 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.09□□□□□ -0.63
Timp3P39876 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.09□□□□□ -0.63
Timp3P39876 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Timp3P39876 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Timp3P39876 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.09□□□□□ -0.63
Timp3P39876 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.09□□□□□ -0.63
Timp3P39876 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.09□□□□□ -0.63
Timp3P39876 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.09□□□□□ -0.63
Timp3P39876 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.09□□□□□ -0.63
Timp3P39876 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Timp3P39876 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Timp3P39876 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Timp3P39876 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Timp3P39876 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Timp3P39876 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.08□□□□□ -0.64
Timp3P39876 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Timp3P39876 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Timp3P39876 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.08□□□□□ -0.64
Timp3P39876 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.08□□□□□ -0.64
Timp3P39876 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.08□□□□□ -0.64
Timp3P39876 Gm13385-201ENSMUST00000121089 220 ntBASIC11.08□□□□□ -0.64
Timp3P39876 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.08□□□□□ -0.64
Timp3P39876 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Timp3P39876 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.08□□□□□ -0.64
Timp3P39876 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Timp3P39876 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.08□□□□□ -0.64
Timp3P39876 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Timp3P39876 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms