Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cdkn1aP39689 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdkn1aP39689 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cdkn1aP39689 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdkn1aP39689 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdkn1aP39689 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cdkn1aP39689 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.14□□□□□ -0.63
Cdkn1aP39689 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Itm2b-204ENSMUST00000228637 783 ntBASIC11.14□□□□□ -0.63
Cdkn1aP39689 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cdkn1aP39689 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Gm6091-201ENSMUST00000098307 165 ntBASIC11.13□□□□□ -0.63
Cdkn1aP39689 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cdkn1aP39689 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms