Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VtnP29788 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.26□□□□□ -0.45
VtnP29788 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VtnP29788 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.25□□□□□ -0.45
VtnP29788 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.25□□□□□ -0.45
VtnP29788 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VtnP29788 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.25□□□□□ -0.45
VtnP29788 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.25□□□□□ -0.45
VtnP29788 Mir7085-201ENSMUST00000184353 66 ntBASIC12.25□□□□□ -0.45
VtnP29788 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.25□□□□□ -0.45
VtnP29788 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.25□□□□□ -0.45
VtnP29788 Gm19078-201ENSMUST00000206311 727 ntBASIC12.25□□□□□ -0.45
VtnP29788 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.25□□□□□ -0.45
VtnP29788 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
VtnP29788 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VtnP29788 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.25□□□□□ -0.45
VtnP29788 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VtnP29788 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VtnP29788 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
VtnP29788 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.25□□□□□ -0.45
VtnP29788 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Gm11524-201ENSMUST00000119349 807 ntBASIC12.24□□□□□ -0.45
VtnP29788 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.24□□□□□ -0.45
VtnP29788 Gm15376-201ENSMUST00000122258 783 ntBASIC12.24□□□□□ -0.45
VtnP29788 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
VtnP29788 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.24□□□□□ -0.45
VtnP29788 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.24□□□□□ -0.45
VtnP29788 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.24□□□□□ -0.45
VtnP29788 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.24□□□□□ -0.45
VtnP29788 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
VtnP29788 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
VtnP29788 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.24□□□□□ -0.45
VtnP29788 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VtnP29788 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
VtnP29788 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
VtnP29788 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms