Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm20760-201ENSMUST00000179197 648 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm5587-201ENSMUST00000206270 674 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm7787-201ENSMUST00000216858 688 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Smim1P0C8K7 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.25□□□□□ -0.93
Smim1P0C8K7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.24□□□□□ -0.93
Smim1P0C8K7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.24□□□□□ -0.93
Smim1P0C8K7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.24□□□□□ -0.93
Smim1P0C8K7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.24□□□□□ -0.93
Smim1P0C8K7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.24□□□□□ -0.93
Smim1P0C8K7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smim1P0C8K7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms