Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.73□□□□□ -0.05
Chmp6P0C0A3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp6P0C0A3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp6P0C0A3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp6P0C0A3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.71□□□□□ -0.06
Chmp6P0C0A3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms