Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.79□□□□□ -0.36
ApoeP08226 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ApoeP08226 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.79□□□□□ -0.36
ApoeP08226 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ApoeP08226 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.79□□□□□ -0.36
ApoeP08226 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.78□□□□□ -0.36
ApoeP08226 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ApoeP08226 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.78□□□□□ -0.36
ApoeP08226 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ApoeP08226 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ApoeP08226 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.78□□□□□ -0.36
ApoeP08226 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.78□□□□□ -0.36
ApoeP08226 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.78□□□□□ -0.36
ApoeP08226 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ApoeP08226 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
ApoeP08226 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ApoeP08226 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ApoeP08226 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ApoeP08226 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ApoeP08226 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ApoeP08226 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ApoeP08226 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ApoeP08226 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.77□□□□□ -0.36
ApoeP08226 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.77□□□□□ -0.37
ApoeP08226 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Gm13015-201ENSMUST00000118674 204 ntBASIC12.77□□□□□ -0.37
ApoeP08226 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Gm17271-201ENSMUST00000165535 355 ntBASIC12.77□□□□□ -0.37
ApoeP08226 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ApoeP08226 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ApoeP08226 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
ApoeP08226 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ApoeP08226 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ApoeP08226 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ApoeP08226 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ApoeP08226 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.76□□□□□ -0.37
ApoeP08226 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
ApoeP08226 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ApoeP08226 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms