Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.33□□□□□ -0.44
Col4a2P08122 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.33□□□□□ -0.44
Col4a2P08122 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.33□□□□□ -0.44
Col4a2P08122 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col4a2P08122 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col4a2P08122 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col4a2P08122 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a2P08122 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Col4a2P08122 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.32□□□□□ -0.44
Col4a2P08122 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm7857-201ENSMUST00000117957 358 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm24990-201ENSMUST00000157406 323 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.32□□□□□ -0.44
Col4a2P08122 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm16505-201ENSMUST00000179981 232 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm2260-201ENSMUST00000184965 657 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.32□□□□□ -0.44
Col4a2P08122 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.32□□□□□ -0.44
Col4a2P08122 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a2P08122 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm14130-201ENSMUST00000118417 987 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Col4a2P08122 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a2P08122 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col4a2P08122 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Col4a2P08122 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.31□□□□□ -0.44
Col4a2P08122 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.31□□□□□ -0.44
Col4a2P08122 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.31□□□□□ -0.44
Col4a2P08122 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms