Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.92■□□□□ 0.14
Col3a1P08121 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.92■□□□□ 0.14
Col3a1P08121 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col3a1P08121 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col3a1P08121 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.92■□□□□ 0.14
Col3a1P08121 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col3a1P08121 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col3a1P08121 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col3a1P08121 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col3a1P08121 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Gm26083-201ENSMUST00000157904 193 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Gm18584-201ENSMUST00000203098 964 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Gm6334-201ENSMUST00000207083 228 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Gm6458-201ENSMUST00000211573 635 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.91■□□□□ 0.14
Col3a1P08121 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col3a1P08121 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.91■□□□□ 0.14
Col3a1P08121 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Col3a1P08121 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm45865-201ENSMUST00000211815 945 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.91■□□□□ 0.14
Col3a1P08121 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col3a1P08121 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col3a1P08121 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col3a1P08121 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.9■□□□□ 0.14
Col3a1P08121 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col3a1P08121 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Gm12241-201ENSMUST00000118330 726 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Gm13297-201ENSMUST00000120205 934 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.9■□□□□ 0.14
Col3a1P08121 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.9■□□□□ 0.14
Col3a1P08121 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.9■□□□□ 0.14
Col3a1P08121 Gm4857-201ENSMUST00000192718 785 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Gm6621-201ENSMUST00000193251 772 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Gm21769-201ENSMUST00000211922 111 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Gm9368-201ENSMUST00000219348 831 ntBASIC15.9■□□□□ 0.14
Col3a1P08121 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col3a1P08121 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Col3a1P08121 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col3a1P08121 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.89■□□□□ 0.13
Col3a1P08121 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col3a1P08121 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.89■□□□□ 0.13
Col3a1P08121 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.89■□□□□ 0.13
Col3a1P08121 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms