Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col4a1P02463 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.27■□□□□ 0.2
Col4a1P02463 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Gm11439-201ENSMUST00000118598 409 ntBASIC16.27■□□□□ 0.2
Col4a1P02463 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.27■□□□□ 0.2
Col4a1P02463 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 Gm24990-201ENSMUST00000157406 323 ntBASIC16.27■□□□□ 0.2
Col4a1P02463 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 Gm2546-201ENSMUST00000182630 991 ntBASIC16.27■□□□□ 0.2
Col4a1P02463 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.27■□□□□ 0.2
Col4a1P02463 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Col4a1P02463 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col4a1P02463 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col4a1P02463 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.27■□□□□ 0.19
Col4a1P02463 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col4a1P02463 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col4a1P02463 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col4a1P02463 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.27■□□□□ 0.19
Col4a1P02463 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col4a1P02463 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col4a1P02463 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.26■□□□□ 0.19
Col4a1P02463 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.26■□□□□ 0.19
Col4a1P02463 Gm25668-201ENSMUST00000157700 129 ntBASIC16.26■□□□□ 0.19
Col4a1P02463 Gm2260-201ENSMUST00000184965 657 ntBASIC16.26■□□□□ 0.19
Col4a1P02463 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.26■□□□□ 0.19
Col4a1P02463 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col4a1P02463 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.25■□□□□ 0.19
Col4a1P02463 Gm14726-201ENSMUST00000120623 896 ntBASIC16.25■□□□□ 0.19
Col4a1P02463 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC16.25■□□□□ 0.19
Col4a1P02463 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.25■□□□□ 0.19
Col4a1P02463 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.25■□□□□ 0.19
Col4a1P02463 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.25■□□□□ 0.19
Col4a1P02463 Gm22058-201ENSMUST00000083393 310 ntBASIC16.25■□□□□ 0.19
Col4a1P02463 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col4a1P02463 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col4a1P02463 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col4a1P02463 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.24■□□□□ 0.19
Col4a1P02463 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms