Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.86□□□□□ -0.83
TcraP01849 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.86□□□□□ -0.83
TcraP01849 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.86□□□□□ -0.83
TcraP01849 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.86□□□□□ -0.83
TcraP01849 Mzt1-203ENSMUST00000227948 952 ntBASIC9.86□□□□□ -0.83
TcraP01849 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TcraP01849 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
TcraP01849 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.86□□□□□ -0.83
TcraP01849 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.86□□□□□ -0.83
TcraP01849 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
TcraP01849 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
TcraP01849 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
TcraP01849 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.85□□□□□ -0.83
TcraP01849 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
TcraP01849 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.85□□□□□ -0.83
TcraP01849 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
TcraP01849 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
TcraP01849 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.85□□□□□ -0.83
TcraP01849 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.85□□□□□ -0.83
TcraP01849 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.85□□□□□ -0.83
TcraP01849 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.85□□□□□ -0.83
TcraP01849 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.85□□□□□ -0.83
TcraP01849 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Gm27628-201ENSMUST00000184911 107 ntBASIC9.85□□□□□ -0.83
TcraP01849 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC9.85□□□□□ -0.83
TcraP01849 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.85□□□□□ -0.83
TcraP01849 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
TcraP01849 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.85□□□□□ -0.83
TcraP01849 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TcraP01849 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms