Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Gm13226-201ENSMUST00000117838 404 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.57□□□□□ -0.08
Vti1aO89116 Gm17420-201ENSMUST00000164753 153 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vti1aO89116 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Mir497b-201ENSMUST00000093601 125 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.57□□□□□ -0.08
Vti1aO89116 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.57□□□□□ -0.08
Vti1aO89116 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1aO89116 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.56□□□□□ -0.08
Vti1aO89116 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.56□□□□□ -0.08
Vti1aO89116 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.56□□□□□ -0.08
Vti1aO89116 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
Vti1aO89116 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.56□□□□□ -0.08
Vti1aO89116 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.56□□□□□ -0.08
Vti1aO89116 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.56□□□□□ -0.08
Vti1aO89116 Gm6983-201ENSMUST00000214912 628 ntBASIC14.56□□□□□ -0.08
Vti1aO89116 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1aO89116 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1aO89116 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vti1aO89116 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.55□□□□□ -0.08
Vti1aO89116 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.55□□□□□ -0.08
Vti1aO89116 Gm8062-201ENSMUST00000139696 444 ntBASIC14.55□□□□□ -0.08
Vti1aO89116 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vti1aO89116 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Vti1aO89116 Gm2445-201ENSMUST00000182798 989 ntBASIC14.55□□□□□ -0.08
Vti1aO89116 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.55□□□□□ -0.08
Vti1aO89116 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.55□□□□□ -0.08
Vti1aO89116 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
Vti1aO89116 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1aO89116 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.54□□□□□ -0.08
Vti1aO89116 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Vti1aO89116 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Vti1aO89116 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1aO89116 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.54□□□□□ -0.08
Vti1aO89116 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms