Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.04□□□□□ -0.48
CcnkO88874 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.04□□□□□ -0.48
CcnkO88874 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CcnkO88874 Gm29310-201ENSMUST00000185468 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21825-201ENSMUST00000185728 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm29109-201ENSMUST00000185895 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21896-201ENSMUST00000186520 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21873-201ENSMUST00000186728 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21794-201ENSMUST00000187056 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21880-201ENSMUST00000187275 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21826-201ENSMUST00000187451 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21198-201ENSMUST00000188393 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21749-201ENSMUST00000189343 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21901-201ENSMUST00000189568 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm29424-201ENSMUST00000189716 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm28599-201ENSMUST00000189838 694 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21867-201ENSMUST00000189917 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm29269-201ENSMUST00000190087 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21722-201ENSMUST00000190153 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm28423-201ENSMUST00000190701 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21899-201ENSMUST00000190745 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21910-201ENSMUST00000191163 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21849-201ENSMUST00000191571 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm28678-201ENSMUST00000191593 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm20910-201ENSMUST00000193268 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 Gm21871-201ENSMUST00000194621 696 ntBASIC12.04□□□□□ -0.48
CcnkO88874 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CcnkO88874 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.04□□□□□ -0.48
CcnkO88874 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CcnkO88874 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CcnkO88874 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.03□□□□□ -0.48
CcnkO88874 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.03□□□□□ -0.48
CcnkO88874 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.03□□□□□ -0.48
CcnkO88874 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Gm9824-201ENSMUST00000178707 561 ntBASIC12.03□□□□□ -0.48
CcnkO88874 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcnkO88874 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcnkO88874 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcnkO88874 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.03□□□□□ -0.48
CcnkO88874 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CcnkO88874 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.03□□□□□ -0.48
CcnkO88874 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CcnkO88874 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CcnkO88874 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.02□□□□□ -0.48
CcnkO88874 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.02□□□□□ -0.48
CcnkO88874 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.02□□□□□ -0.48
CcnkO88874 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcnkO88874 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CcnkO88874 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcnkO88874 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcnkO88874 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcnkO88874 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcnkO88874 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.02□□□□□ -0.49
CcnkO88874 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.02□□□□□ -0.49
CcnkO88874 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcnkO88874 Gm44335-201ENSMUST00000196879 141 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms