Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lmx1bO88609 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Grk6-205ENSMUST00000224653 2976 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm12928-201ENSMUST00000117115 573 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm11425-201ENSMUST00000119608 498 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm18062-201ENSMUST00000208020 547 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm18055-201ENSMUST00000208254 547 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm9396-201ENSMUST00000076703 567 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.25□□□□□ -0.45
Lmx1bO88609 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lmx1bO88609 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lmx1bO88609 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lmx1bO88609 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lmx1bO88609 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Mir1894-201ENSMUST00000122802 81 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lmx1bO88609 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.24□□□□□ -0.45
Lmx1bO88609 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.24□□□□□ -0.45
Lmx1bO88609 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Gm8463-201ENSMUST00000208573 613 ntBASIC12.24□□□□□ -0.45
Lmx1bO88609 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lmx1bO88609 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms