Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cops6O88545 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cops6O88545 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Cops6O88545 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cops6O88545 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Gm14723-201ENSMUST00000118686 215 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.42■□□□□ 0.22
Cops6O88545 Gm6222-202ENSMUST00000182143 629 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Gm43133-201ENSMUST00000197472 463 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.42■□□□□ 0.22
Cops6O88545 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cops6O88545 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cops6O88545 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cops6O88545 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cops6O88545 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Cops6O88545 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Gm42627-201ENSMUST00000197347 224 ntBASIC16.41■□□□□ 0.22
Cops6O88545 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.41■□□□□ 0.22
Cops6O88545 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.41■□□□□ 0.22
Cops6O88545 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.41■□□□□ 0.22
Cops6O88545 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.41■□□□□ 0.22
Cops6O88545 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.41■□□□□ 0.22
Cops6O88545 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.41■□□□□ 0.22
Cops6O88545 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.41■□□□□ 0.22
Cops6O88545 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cops6O88545 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops6O88545 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops6O88545 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cops6O88545 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Cops6O88545 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.4■□□□□ 0.22
Cops6O88545 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops6O88545 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.4■□□□□ 0.22
Cops6O88545 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.4■□□□□ 0.22
Cops6O88545 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Cops6O88545 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.4■□□□□ 0.22
Cops6O88545 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cops6O88545 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms