Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm29741-201ENSMUST00000192667 421 ntBASIC12.47□□□□□ -0.41
Cops4O88544 AW822252-206ENSMUST00000208904 237 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.47□□□□□ -0.41
Cops4O88544 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.47□□□□□ -0.41
Cops4O88544 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cops4O88544 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.47□□□□□ -0.41
Cops4O88544 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cops4O88544 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cops4O88544 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cops4O88544 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.46□□□□□ -0.41
Cops4O88544 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.46□□□□□ -0.41
Cops4O88544 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cops4O88544 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cops4O88544 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cops4O88544 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.46□□□□□ -0.41
Cops4O88544 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cops4O88544 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cops4O88544 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cops4O88544 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.46□□□□□ -0.42
Cops4O88544 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cops4O88544 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.46□□□□□ -0.42
Cops4O88544 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.45□□□□□ -0.42
Cops4O88544 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.45□□□□□ -0.42
Cops4O88544 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.45□□□□□ -0.42
Cops4O88544 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.45□□□□□ -0.42
Cops4O88544 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.45□□□□□ -0.42
Cops4O88544 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cops4O88544 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cops4O88544 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cops4O88544 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms