Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm27628-201ENSMUST00000184911 107 ntBASIC11.32□□□□□ -0.6
Pfdn2O70591 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pfdn2O70591 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.32□□□□□ -0.6
Pfdn2O70591 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pfdn2O70591 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Pfdn2O70591 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Gm18733-201ENSMUST00000173950 856 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.31□□□□□ -0.6
Pfdn2O70591 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.31□□□□□ -0.6
Pfdn2O70591 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pfdn2O70591 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pfdn2O70591 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pfdn2O70591 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.3□□□□□ -0.6
Pfdn2O70591 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.3□□□□□ -0.6
Pfdn2O70591 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pfdn2O70591 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pfdn2O70591 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pfdn2O70591 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pfdn2O70591 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms