Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.56□□□□□ -0.4
BckdkO55028 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
BckdkO55028 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.56□□□□□ -0.4
BckdkO55028 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.56□□□□□ -0.4
BckdkO55028 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
BckdkO55028 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
BckdkO55028 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.55□□□□□ -0.4
BckdkO55028 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.55□□□□□ -0.4
BckdkO55028 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Gm5354-201ENSMUST00000182417 973 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.55□□□□□ -0.4
BckdkO55028 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Grk6-205ENSMUST00000224653 2976 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.55□□□□□ -0.4
BckdkO55028 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
BckdkO55028 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
BckdkO55028 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.54□□□□□ -0.4
BckdkO55028 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.54□□□□□ -0.4
BckdkO55028 Mir6392-201ENSMUST00000184924 108 ntBASIC12.54□□□□□ -0.4
BckdkO55028 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.54□□□□□ -0.4
BckdkO55028 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Gm9908-201ENSMUST00000211534 448 ntBASIC12.54□□□□□ -0.4
BckdkO55028 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
BckdkO55028 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
BckdkO55028 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BckdkO55028 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms