Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cldn5O54942 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Gm13050-201ENSMUST00000122149 1345 ntBASIC14□□□□□ -0.17
Cldn5O54942 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Gm11400-201ENSMUST00000120853 1214 ntBASIC14□□□□□ -0.17
Cldn5O54942 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cldn5O54942 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14□□□□□ -0.17
Cldn5O54942 Gm8810-201ENSMUST00000172895 754 ntBASIC14□□□□□ -0.17
Cldn5O54942 Gm8835-201ENSMUST00000173096 1169 ntBASIC14□□□□□ -0.17
Cldn5O54942 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14□□□□□ -0.17
Cldn5O54942 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14□□□□□ -0.17
Cldn5O54942 Gm42929-201ENSMUST00000198374 1286 ntBASIC14□□□□□ -0.17
Cldn5O54942 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cldn5O54942 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14□□□□□ -0.17
Cldn5O54942 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cldn5O54942 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Cldn5O54942 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cldn5O54942 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.99□□□□□ -0.17
Cldn5O54942 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
Cldn5O54942 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldn5O54942 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.99□□□□□ -0.17
Cldn5O54942 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cldn5O54942 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm24196-201ENSMUST00000179161 110 ntBASIC13.99□□□□□ -0.17
Cldn5O54942 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm18062-201ENSMUST00000208020 547 ntBASIC13.99□□□□□ -0.17
Cldn5O54942 Gm18055-201ENSMUST00000208254 547 ntBASIC13.99□□□□□ -0.17
Cldn5O54942 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cldn5O54942 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Cldn5O54942 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Cldn5O54942 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.99□□□□□ -0.17
Cldn5O54942 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cldn5O54942 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cldn5O54942 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.98□□□□□ -0.17
Cldn5O54942 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.98□□□□□ -0.17
Cldn5O54942 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn5O54942 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.98□□□□□ -0.17
Cldn5O54942 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn5O54942 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms