Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Gm17795-201ENSMUST00000214505 757 ntBASIC14.54□□□□□ -0.08
Nr1i3O35627 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1i3O35627 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1i3O35627 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Nr1i3O35627 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.53□□□□□ -0.08
Nr1i3O35627 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1i3O35627 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.53□□□□□ -0.08
Nr1i3O35627 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Nr1i3O35627 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.52□□□□□ -0.08
Nr1i3O35627 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nr1i3O35627 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nr1i3O35627 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gm13616-201ENSMUST00000120600 222 ntBASIC14.52□□□□□ -0.09
Nr1i3O35627 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gm27306-201ENSMUST00000183970 107 ntBASIC14.52□□□□□ -0.09
Nr1i3O35627 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Nr1i3O35627 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.52□□□□□ -0.09
Nr1i3O35627 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.52□□□□□ -0.09
Nr1i3O35627 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.52□□□□□ -0.09
Nr1i3O35627 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.52□□□□□ -0.09
Nr1i3O35627 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Nr1i3O35627 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nr1i3O35627 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms