Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.69□□□□□ -0.7
Efnb3O35393 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Gm27702-201ENSMUST00000184512 56 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.69□□□□□ -0.7
Efnb3O35393 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Gm18057-201ENSMUST00000208220 503 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Efnb3O35393 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.68□□□□□ -0.7
Efnb3O35393 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Efnb3O35393 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.68□□□□□ -0.7
Efnb3O35393 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Efnb3O35393 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Gm14822-201ENSMUST00000122247 291 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.68□□□□□ -0.7
Efnb3O35393 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.68□□□□□ -0.7
Efnb3O35393 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.68□□□□□ -0.7
Efnb3O35393 Gm20553-201ENSMUST00000204205 844 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Efnb3O35393 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.68□□□□□ -0.7
Efnb3O35393 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Efnb3O35393 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Efnb3O35393 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Efnb3O35393 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Efnb3O35393 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Efnb3O35393 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Efnb3O35393 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Efnb3O35393 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Efnb3O35393 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms