Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.57□□□□□ -0.56
Casp6O08738 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.57□□□□□ -0.56
Casp6O08738 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.57□□□□□ -0.56
Casp6O08738 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Casp6O08738 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Casp6O08738 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Casp6O08738 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Casp6O08738 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Casp6O08738 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Casp6O08738 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Casp6O08738 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.56□□□□□ -0.56
Casp6O08738 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Gm18054-201ENSMUST00000207539 555 ntBASIC11.56□□□□□ -0.56
Casp6O08738 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.56□□□□□ -0.56
Casp6O08738 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.56□□□□□ -0.56
Casp6O08738 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.56□□□□□ -0.56
Casp6O08738 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.56□□□□□ -0.56
Casp6O08738 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Casp6O08738 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.56□□□□□ -0.56
Casp6O08738 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.56□□□□□ -0.56
Casp6O08738 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.55□□□□□ -0.56
Casp6O08738 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Casp6O08738 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.55□□□□□ -0.56
Casp6O08738 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Gm11618-201ENSMUST00000117946 267 ntBASIC11.55□□□□□ -0.56
Casp6O08738 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.55□□□□□ -0.56
Casp6O08738 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.55□□□□□ -0.56
Casp6O08738 Gm38002-201ENSMUST00000193255 180 ntBASIC11.55□□□□□ -0.56
Casp6O08738 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Casp6O08738 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.55□□□□□ -0.56
Casp6O08738 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Casp6O08738 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Casp6O08738 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.54□□□□□ -0.56
Casp6O08738 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Casp6O08738 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Casp6O08738 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Casp6O08738 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.54□□□□□ -0.56
Casp6O08738 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Casp6O08738 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Casp6O08738 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Casp6O08738 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms