Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.44□□□□□ -0.26
Gm3139J3QK78 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Gm3139J3QK78 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Gm3139J3QK78 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.43□□□□□ -0.26
Gm3139J3QK78 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Gm10012-201ENSMUST00000078252 192 ntBASIC13.43□□□□□ -0.26
Gm3139J3QK78 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Gm3139J3QK78 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.42□□□□□ -0.26
Gm3139J3QK78 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm3139J3QK78 Gm27847-201ENSMUST00000183711 107 ntBASIC13.42□□□□□ -0.26
Gm3139J3QK78 Gm27375-201ENSMUST00000183799 107 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms