Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Mir7686-201ENSMUST00000200604 57 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Defa-ps17-201ENSMUST00000121849 171 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Mir7076-201ENSMUST00000183519 74 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 Snora73b-201ENSMUST00000083419 205 ntBASIC10.82□□□□□ -0.68
Chd6A3KFM7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd6A3KFM7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm13937-201ENSMUST00000121000 988 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm15881-201ENSMUST00000148792 942 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm1821-202ENSMUST00000227415 750 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm12015-201ENSMUST00000117065 843 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm18463-201ENSMUST00000207258 474 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.81□□□□□ -0.68
Chd6A3KFM7 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chd6A3KFM7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.8□□□□□ -0.68
Chd6A3KFM7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.8□□□□□ -0.68
Chd6A3KFM7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chd6A3KFM7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd6A3KFM7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms