Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm9824-201ENSMUST00000178707 561 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm2451-201ENSMUST00000199447 999 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm10290-201ENSMUST00000200451 999 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm43125-201ENSMUST00000201724 730 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm23935-201ENSMUST00000102303 57 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm24270-201ENSMUST00000102326 57 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm24245-201ENSMUST00000157318 57 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm44335-201ENSMUST00000196879 141 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm44297-201ENSMUST00000198304 141 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm44346-201ENSMUST00000198851 141 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm5312-201ENSMUST00000203728 547 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Olfr286-202ENSMUST00000205305 969 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm8396-201ENSMUST00000057361 823 ntBASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav6n-6A0A075B6B2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms