Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Trav8-1A0A075B641 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm5939-201ENSMUST00000119613 2874 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm6089-201ENSMUST00000197666 938 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm10176-201ENSMUST00000159707 2264 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav8-1A0A075B641 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav8-1A0A075B641 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms