Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm12957-201ENSMUST00000117835 377 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm12203-201ENSMUST00000118235 598 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm12209-201ENSMUST00000120089 596 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm16177-201ENSMUST00000120728 718 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm37424-201ENSMUST00000191727 561 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gm11618-201ENSMUST00000117946 267 ntBASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gm37497-201ENSMUST00000195830 798 ntBASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcb1Q9Z0H3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcb1Q9Z0H3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.98□□□□□ -0.17
Smarcb1Q9Z0H3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms