Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm10154-201ENSMUST00000084445 354 ntBASIC10.52□□□□□ -0.73
CcsQ9WU84 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CcsQ9WU84 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CcsQ9WU84 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.51□□□□□ -0.73
CcsQ9WU84 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.51□□□□□ -0.73
CcsQ9WU84 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.51□□□□□ -0.73
CcsQ9WU84 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.51□□□□□ -0.73
CcsQ9WU84 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm8396-201ENSMUST00000057361 823 ntBASIC10.51□□□□□ -0.73
CcsQ9WU84 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CcsQ9WU84 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CcsQ9WU84 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CcsQ9WU84 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.5□□□□□ -0.73
CcsQ9WU84 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CcsQ9WU84 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CcsQ9WU84 Rprl2-201ENSMUST00000157150 290 ntBASIC10.5□□□□□ -0.73
CcsQ9WU84 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms