Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Gm10275-202ENSMUST00000168697 495 ntBASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Gm10275-201ENSMUST00000092620 635 ntBASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Matn2-203ENSMUST00000226766 3252 ntBASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pfdn5Q9WU28 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm7153-201ENSMUST00000117092 455 ntBASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm25925-201ENSMUST00000158314 306 ntBASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pfdn5Q9WU28 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.09□□□□□ -0.63
Pfdn5Q9WU28 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms